Consensus Co-Expression Analysis Identifies A Common Set Of Co-Expressed Genes Associated With Diabetic Peripheral Neuropathy And Chemotherapy-Induced Peripheral Neuropathy. Kober KM, Chavez-Iglesias E, Cho NW, Yom S, Dixit N, Sirota M, Chan A, Olshen A. bioRxiv. 2025 Nov 18;. doi: 10.1101/2025.11.18.689101. PubMed PMID: 41332704; PubMed Central PMCID: PMC12667829.
Alternative Splicing And Global Transcriptome Changes Associated With LPS Stimulation In Human Peripheral Blood Mononuclear Cells. Chavez-Iglesias E, Sucher A, Thati N, Trudeau J, Yom S, Sirota M, Olshen A, Cho NW, Kober KM. bioRxiv. 2025 Nov 10;. doi: 10.1101/2025.11.09.687437. PubMed PMID: 41292868; PubMed Central PMCID: PMC12642489.
A Data-Driven Epigenetic Characterization of Morning Fatigue Severity in Oncology Patients Receiving Chemotherapy: Associations With Epigenetic Age Acceleration, Blood Cell Types, and Expression-Associated Methylation. Le C, Lewis M, Harris CS, Berger L, Chavez-Iglesias E, Morse L, Sucher A, Roy R, Olshen A, Hammer MJ, Paul S, Wallhagen M, Chan R, Sayer M, Yom S, Cho NW, Chan A, Levine J, Dhruva A, Miaskowski C, Conley YP, Kober KM. Cancer Med. 2025 Aug;14(15):e71067. doi: 10.1002/cam4.71067. PubMed PMID: 40709591; PubMed Central PMCID: PMC12290682.
Therapeutic radiation drives leptomeningeal dissemination of medulloblastoma through an innate immune process. Nör C, Kharas K, Rasnitsyn A, Vladoiu MC, Cho NW, Young JS, Nör F, Mankahla N, Haapasalo J, Nordfors K, Rapic S, Skowron P, Suárez RA, Bahcheli AT, Ocsenas O, Chen X, Bahrampour S, Momin A, Sundaresan L, Ong W, Hendrikse LD, Abeysundara N, Juraschka K, Ly M, Pallota JG, Douglas T, Huang N, Wang H, Mak E, Qin L, Liu J, Shen L, Luu B, Manno A, Kumar SA, Donovan LK, Fong V, Richman C, Daniels C, Garzia L, Rich JN, Hawkins C, Wu X, DaCosta R, Reimand J, Huang X, Ramaswamy V, Raleigh DR, Taylor MD. Dev Cell. 2025 Nov 3;60(21):2880-2896.e7. doi: 10.1016/j.devcel.2025.06.016. Epub 2025 Jul 2. PubMed PMID: 40609543; NIHMSID:NIHMS2090341.
IL-6 underlies microenvironment immunosuppression and resistance to therapy in glioblastoma. Young JS, Cho NW, Lucas CG, Najem H, Mirchia K, Chen WC, Seo K, Zakimi N, Daggubati V, Casey-Clyde T, Nguyen MP, Chen A, Phillips JJ, Ozawa T, Aghi MK, Taylor JW, DeRisi JL, Bhaduri A, Berger MS, Heimberger AB, Butowski N, Spitzer MH, Raleigh DR. bioRxiv. 2025 Mar 14;. doi: 10.1101/2025.03.12.642800. PubMed PMID: 40161763; PubMed Central PMCID: PMC11952432.
Coordinated macrophage and T cell interactions mediate response to checkpoint blockade in colorectal cancer. Mestrallet G, Brown M, Vaninov N, Cho NW, Velazquez L, Ananthanarayanan A, Spitzer M, Vabret N, Bozkus CC, Samstein RM, Bhardwaj N. bioRxiv. 2025 Feb 17;. doi: 10.1101/2025.02.12.637954. PubMed PMID: 40027748; PubMed Central PMCID: PMC11870396.
T cells Instruct Immune Checkpoint Inhibitor Therapy Resistance in Tumors Responsive to IL-1 and TNFα Inflammation. Cho NW, Guldberg SM, Nabet BY, Yu JZ, Kim EJ, Hiam-Galvez KJ, Yee JL, DeBarge R, Tenvooren I, Ashitey NA, Lynce F, Dillon DA, Rosenbluth JM, Spitzer MH. Cancer Immunol Res. 2024 Oct 15. doi: 10.1158/2326-6066.CIR-24-0416. Online ahead of print. PMID: 39404741
A Wireless, Multicolor Fluorescence Image Sensor Implant for Real-Time Monitoring in Cancer Therapy. Roschelle M, Rabbani R, Gweon S, Kumar R, Vercruysse A, Cho NW, Spitzer MH, Niknejad AM, Stojanović VM, Anwar M. ArXiv [Preprint]. 2024 Jun 27:arXiv:2406.18881v1. PMID: 38979489
Author Correction: Systemic dysfunction and plasticity of the immune macroenvironment in cancer models. Allen BM, Hiam KJ, Burnett CE, Venida A, DeBarge R, Tenvooren I, Marquez DM, Cho NW, Carmi Y, Spitzer MH. Nat Med. 2024 May;30(5):1502. doi: 10.1038/s41591-024-02947-2. PMID: 38565647
Epigenetic reprogramming shapes the cellular landscape of schwannoma. Liu SJ, Casey-Clyde T, Cho NW, Swinderman J, Pekmezci M, Dougherty MC, Foster K, Chen WC, Villanueva-Meyer JE, Swaney DL, Vasudevan HN, Choudhury A, Pak J, Breshears JD, Lang UE, Eaton CD, Hiam-Galvez KJ, Stevenson E, Chen KH, Lien BV, Wu D, Braunstein SE, Sneed PK, Magill ST, Lim D, McDermott MW, Berger MS, Perry A, Krogan NJ, Hansen MR, Spitzer MH, Gilbert L, Theodosopoulos PV, Raleigh DR. Nat Commun. 2024 Jan 12;15(1):476. doi: 10.1038/s41467-023-40408-5. PMID: 38216587
Systemic dysfunction and plasticity of the immune macroenvironment in cancer models. Allen BM, Hiam KJ, Burnett CE, Venida A, DeBarge R, Tenvooren I, Marquez DM, Cho NW, Carmi Y, Spitzer MH. Nat Med. 2020 Jul;26(7):1125-1134. doi: 10.1038/s41591-020-0892-6. Epub 2020 May 25. PMID: 32451499
In vivo imaging of DNA double-strand break induced telomere mobility during alternative lengthening of telomeres. Cho NW, Lampson MA, Greenberg RA. Methods. 2017 Feb 1;114:54-59. doi: 10.1016/j.ymeth.2016.07.010. Epub 2016 Aug 1. PMID: 27491801
Break-induced telomere synthesis underlies alternative telomere maintenance. Dilley RL, Verma P, Cho NW, Winters HD, Wondisford AR, Greenberg RA. Nature. 2016 Nov 3;539(7627):54-58. doi: 10.1038/nature20099. Epub 2016 Oct 19. PMID: 27760120
DNA repair: Familiar ends with alternative endings. Cho NW, Greenberg RA. Nature. 2015 Feb 12;518(7538):174-6. doi: 10.1038/nature14200. Epub 2015 Feb 4. PMID: 25642961
Whole-exome sequencing identifies somatic ATRX mutations in pheochromocytomas and paragangliomas. Fishbein L, Khare S, Wubbenhorst B, DeSloover D, D'Andrea K, Merrill S, Cho NW, Greenberg RA, Else T, Montone K, LiVolsi V, Fraker D, Daber R, Cohen DL, Nathanson KL. Nat Commun. 2015 Jan 21;6:6140. doi: 10.1038/ncomms7140. PMID: 25608029
Interchromosomal homology searches drive directional ALT telomere movement and synapsis. Cho NW, Dilley RL, Lampson MA, Greenberg RA. Cell. 2014 Sep 25;159(1):108-121. doi: 10.1016/j.cell.2014.08.030. PMID: 25259924
Acetylation limits 53BP1 association with damaged chromatin to promote homologous recombination. Tang J, Cho NW, Cui G, Manion EM, Shanbhag NM, Botuyan MV, Mer G, Greenberg RA. Nat Struct Mol Biol. 2013 Mar;20(3):317-25. doi: 10.1038/nsmb.2499. Epub 2013 Feb 3. PMID: 23377543
Cartilage oligometric matrix protein-angiopoietin-1 promotes revascularization through increased survivin expression in dermal endothelial cells of skin grafts in mice. Byun SJ, Choi KS, Park SH, Cho NW, Hyun Yoo C, Yun KJ, Koh YJ, Koh GY, So BJ, Yoon KH. Am J Pathol. 2007 Nov;171(5):1682-90. doi: 10.2353/ajpath.2007.070142. Epub 2007 Sep 20. PMID: 17884969